MRIQC: individual bold report

Summary

  • BIDS filename: sub-1006_task-MID_run-02_bold.
  • Date and time: 2020-01-23, 00:32.
  • MRIQC version: 0.15.1.
  • Workflow details:
    • Framewise Displacement was computed using AFNI 3dvolreg
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot
Spikes

No high-frequency spikes were found in this dataset

ICA components

Other

aor0.0011296969696969698
aqi0.005392260416666667
dummy_trs1
dvarsnstd27.510070524866915
dvarsstd1.6061194341444875
dvarsvstd0.992757268973385
efc0.4171869036757099
fber5894.798828125
fdmean0.1209599070697936
fdnum13
fdperc4.924242424242424
fwhmavg2.593767777777778
fwhmx2.4834466666666666
fwhmy2.8543566666666664
fwhmz2.4435
gcor0.0194983
gsrx-0.017286119982600212
gsry0.025879671797156334
sizet264
sizex80
sizey80
sizez52
snr4.709798661629817
spacingtr1.75
spacingx3.0
spacingy3.0
spacingz3.0
spikes_num0
summarybgk42.90791955719722
summarybgmad97.6572265625
summarybgmean433.1558837890625
summarybgmedian165.00506591796875
summarybgn238494.0
summarybgp0574.02475128173828
summarybgp951936.477825927734
summarybgstdv917.8865966796875
summaryfgk3.7807905934151353
summaryfgmad1809.7955322265625
summaryfgmean12570.5234375
summaryfgmedian12942.2548828125
summaryfgn45537.0
summaryfgp056840.02412109375
summaryfgp9515918.639843749997
summaryfgstdv2747.912109375
tsnr84.46743774414062
AcquisitionMatrixPE80
AcquisitionNumber1
AcquisitionTime13:52:46.362500
BandwidthPerPixelPhaseEncode24.51
BaseResolution80
BodyPartExaminedBRAIN
CogAtlasIDTODO
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20190410 GCC6.3.0
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber166048
DwellTime2.8e-06
EchoTime0.029
EchoTrainLength80
EffectiveEchoSpacing0.000509996
FlipAngle74
ImageCommentsUnaliased_MB2_PE2_LB
ImageOrientationPatientDICOM[1, 0, 0, 0, 0.984503, -0.175367]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.246
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressNorth_13th_1701_Philadelphia_PA_US_19122
InstitutionNameTemple_University_-_Weiss_Hall
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PhaseEncodingDirectionj-
PhaseEncodingSteps80
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescriptionSmith_Lab_Smith_iStart
ProtocolNamecmrr_mbep2d_mb2_3mm_task-MID_run1
PulseSequenceDetails%CustomerSeq%_cmrr_mbep2d_bold
ReceiveCoilActiveElementsHE1-4
ReceiveCoilNameHeadNeck_20
ReconMatrixPE80
RepetitionTime1.75
SAR0.0571236
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_80
SequenceVariantSK_SS
SeriesDescriptioncmrr_mbep2d_mb2_3mm_task-MID_run1
SeriesNumber10
ShimSetting[1417, -7415, 6475, 291, -42, 9, 43, 5]
SliceThickness3
SliceTiming[0, 1.265, 0.7975, 0.3325, 1.5975, 1.1325, 0.665, 0.2, 1.465, 0.9975, 0.5325, 0.0675, 1.33, 0.865, 0.4, 1.6625, 1.1975, 0.7325, 0.2675, 1.53, 1.065, 0.6, 0.1325, 1.3975, 0.9325, 0.465, 0, 1.265, 0.7975, 0.3325, 1.5975, 1.1325, 0.665, 0.2, 1.465, 0.9975, 0.5325, 0.0675, 1.33, 0.865, 0.4, 1.6625, 1.1975, 0.7325, 0.2675, 1.53, 1.065, 0.6, 0.1325, 1.3975, 0.9325, 0.465]
SoftwareVersionssyngo_MR_E11
SpacingBetweenSlices3
StationNameAWP166048
TaskNameMID
TotalReadoutTime0.0402897
TxRefAmp246.738
WipMemBlock95d4b408-c5f5-459b-a774-f8ee9d5da67b||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum86e6e79e81a67fcdb010c515662e4a74
softwaremriqc
version0.15.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.